PubChem · Schema
PubChem Compound Properties
Schema for the compound properties response from the PubChem PUG REST API property table endpoint.
ChemistryChemical CompoundsDrug DiscoveryBioassayLife SciencesNCBIBioinformatics
Properties
| Name | Type | Description |
|---|---|---|
| PropertyTable | object | Container for the property table response. |
JSON Schema
{
"$schema": "https://json-schema.org/draft/2020-12/schema",
"$id": "https://pubchem.ncbi.nlm.nih.gov/schemas/compound-properties",
"title": "PubChem Compound Properties",
"description": "Schema for the compound properties response from the PubChem PUG REST API property table endpoint.",
"type": "object",
"properties": {
"PropertyTable": {
"type": "object",
"description": "Container for the property table response.",
"properties": {
"Properties": {
"type": "array",
"description": "Array of compound property records.",
"items": {
"$ref": "#/$defs/CompoundProperty"
}
}
},
"required": ["Properties"]
}
},
"required": ["PropertyTable"],
"$defs": {
"CompoundProperty": {
"type": "object",
"description": "Properties for a single PubChem compound.",
"properties": {
"CID": {
"type": "integer",
"description": "PubChem Compound Identifier.",
"example": 2244
},
"MolecularFormula": {
"type": "string",
"description": "Molecular formula of the compound.",
"example": "C9H8O4"
},
"MolecularWeight": {
"type": "string",
"description": "Molecular weight in g/mol.",
"example": "180.16"
},
"CanonicalSMILES": {
"type": "string",
"description": "Canonical SMILES string.",
"example": "CC(=O)OC1=CC=CC=C1C(=O)O"
},
"IsomericSMILES": {
"type": "string",
"description": "Isomeric SMILES string including stereochemistry.",
"example": "CC(=O)OC1=CC=CC=C1C(=O)O"
},
"InChI": {
"type": "string",
"description": "IUPAC International Chemical Identifier.",
"example": "InChI=1S/C9H8O4/c1-6(10)13-8-5-3-2-4-7(8)9(11)12/h2-5H,1H3,(H,11,12)"
},
"InChIKey": {
"type": "string",
"description": "Hashed InChI key for indexing.",
"example": "BSYNRYMUTXBXSQ-UHFFFAOYSA-N"
},
"IUPACName": {
"type": "string",
"description": "IUPAC systematic name.",
"example": "2-acetyloxybenzoic acid"
},
"XLogP": {
"type": "number",
"description": "Computed octanol/water partition coefficient (XLogP3).",
"example": 1.2
},
"ExactMass": {
"type": "string",
"description": "Exact monoisotopic mass.",
"example": "180.042259"
},
"MonoisotopicMass": {
"type": "string",
"description": "Monoisotopic mass.",
"example": "180.042259"
},
"TPSA": {
"type": "number",
"description": "Topological polar surface area in square angstroms.",
"example": 63.6
},
"Complexity": {
"type": "integer",
"description": "Structural complexity rating.",
"example": 212
},
"Charge": {
"type": "integer",
"description": "Formal charge of the compound.",
"example": 0
},
"HBondDonorCount": {
"type": "integer",
"description": "Number of hydrogen bond donors.",
"example": 1
},
"HBondAcceptorCount": {
"type": "integer",
"description": "Number of hydrogen bond acceptors.",
"example": 4
},
"RotatableBondCount": {
"type": "integer",
"description": "Number of rotatable bonds.",
"example": 3
},
"HeavyAtomCount": {
"type": "integer",
"description": "Number of non-hydrogen atoms.",
"example": 13
}
},
"required": ["CID"]
}
}
}